Table 2 Fold change of top 30 circRNAs up-regulation
From: Circular RNA profiles in mouse lung tissue induced by radon
CircBase ID | Fold Change | best_transcript | GeneSymbol | miRNA Binding Sites 1 | miRNA Binding Sites 2 | miRNA Binding Sites3 | miRNA Binding Sites4 | miRNA Binding Sites5 |
|---|---|---|---|---|---|---|---|---|
mmu_circ_0001028 | 35.63598 | NM_016866 | Stk39 | mmu-miR-703 | mmu-miR-879-3p | mmu-miR-3058-5p | mmu-miR-693-3p | mmu-miR-7015-5p |
mmu_circ_0001311 | 22.46768 | NM_001003909 | Ankib1 | mmu-miR-103-3p | mmu-miR-107-3p | mmu-miR-7092-3p | mmu-miR-712-5p | mmu-miR-6935-3p |
mmu_circ_0001154 | 13.69381 | NM_133869 | Cept1 | mmu-miR-6946-3p | mmu-miR-22-5p | mmu-miR-1955-5p | mmu-miR-298-5p | mmu-miR-500-5p |
mmu_circ_0001052 | 13.58701 | NM_001145824 | Hipk3 | mmu-miR-7222-5p | mmu-miR-1929-5p | mmu-miR-338-3p | mmu-miR-6922-3p | mmu-miR-143-5p |
mmu_circ_0001796 | 12.02444 | NM_172536 | Zfp609 | mmu-miR-7009-3p | mmu-miR-3971 | mmu-miR-6974-3p | mmu-miR-6975-3p | mmu-miR-344 g-3p |
mmu_circ_0001691 | 8.370497 | NM_030113 | Arhgap10 | mmu-miR-6898-3p | mmu-miR-7221-5p | mmu-miR-201-3p | mmu-miR-210-5p | mmu-miR-326-3p |
mmu_circ_0001059 | 7.40114 | NM_029617 | Casc5 | mmu-miR-6344 | mmu-miR-7035-5p | mmu-miR-28a-5p | mmu-miR-7233-3p | mmu-miR-28c |
mmu_circ_0000225 | 7.036664 | mmu-miR-8092 | mmu-miR-875-3p | mmu-miR-7679-3p | mmu-miR-532-5p | mmu-miR-6481 | ||
mmu_circ_0000451 | 6.093728 | NM_001123386 | Cdyl | mmu-miR-7083-5p | mmu-miR-6902-5p | mmu-miR-185-3p | mmu-miR-3085-3p | mmu-miR-3064-5p |
mmu_circ_0001457 | 5.334011 | NM_013791 | Mkln1 | mmu-miR-30d-3p | mmu-miR-3071-3p | mmu-miR-7214-5p | mmu-miR-5615-5p | mmu-miR-7b-5p |
mmu_circ_0001797 | 5.213906 | NM_172536 | Zfp609 | mmu-miR-7009-3p | mmu-miR-3971 | mmu-miR-6974-3p | mmu-miR-6975-3p | mmu-miR-6961-3p |
mmu_circ_0000807 | 4.974568 | NM_001025572 | Ankrd12 | mmu-miR-7092-3p | mmu-miR-683 | mmu-miR-6944-3p | mmu-miR-7684-3p | mmu-miR-6899-3p |
mmu_circ_0001605 | 4.840995 | NM_175388 | Rnf169 | mmu-miR-3095-5p | mmu-miR-693-3p | mmu-miR-207 | mmu-miR-6344 | mmu-miR-7038-3p |
mmu_circ_0000145 | 4.680084 | NM_011682 | Utrn | mmu-miR-6958-3p | mmu-miR-1968-5p | mmu-miR-22-3p | mmu-miR-19b-2-5p | mmu-miR-450b-5p |
mmu_circ_0000350 | 4.620216 | NM_001162465 | Dtnb | mmu-miR-3066-5p | mmu-miR-6938-3p | mmu-miR-6929-5p | mmu-miR-103-1-5p | mmu-miR-103-2-5p |
mmu_circ_0000590 | 4.569337 | NM_018745 | Azin1 | mmu-miR-216a-5p | mmu-miR-7657-3p | mmu-miR-489-5p | mmu-miR-203-5p | mmu-miR-5625-3p |
mmu_circ_0000144 | 4.247965 | NM_011682 | Utrn | mmu-miR-6958-3p | mmu-miR-1968-5p | mmu-miR-22-3p | mmu-miR-328-3p | mmu-miR-19b-2-5p |
mmu_circ_0000906 | 4.241155 | ENSMUST00000182122 | Zfp236 | mmu-miR-1930-3p | mmu-miR-143-5p | mmu-miR-669d-5p | mmu-miR-1187 | mmu-miR-466i-5p |
mmu_circ_0000840 | 4.08919 | NM_001039692 | Arhgap12 | mmu-miR-30c-1-3p | mmu-miR-450a-5p | mmu-miR-30c-2-3p | mmu-miR-592-5p | mmu-miR-320-5p |
mmu_circ_0001113 | 3.831634 | NM_173182 | Fndc3b | mmu-miR-93-3p | mmu-miR-7231-3p | mmu-miR-412-3p | mmu-miR-6998-3p | mmu-miR-298-5p |
mmu_circ_0001692 | 3.745827 | NM_030113 | Arhgap10 | mmu-miR-6898-3p | mmu-miR-201-3p | mmu-miR-326-3p | mmu-miR-7011-3p | mmu-miR-7b-5p |
mmu_circ_0000154 | 3.65036 | NM_018747 | Akap7 | mmu-miR-1903 | mmu-miR-135b-5p | mmu-miR-135a-5p | mmu-miR-106a-5p | mmu-miR-93-5p |
mmu_circ_0001171 | 3.562626 | NM_146141 | Ppa2 | mmu-miR-7092-3p | mmu-miR-6349 | mmu-miR-206-3p | mmu-miR-6382 | mmu-miR-1a-3p |
mmu_circ_0000423 | 3.392009 | NM_011625 | Ppp1r13b | mmu-miR-7649-3p | mmu-miR-6946-3p | mmu-miR-7083-3p | mmu-miR-3473c | mmu-miR-1903 |
mmu_circ_0000046 | 3.298026 | NM_009952 | Creb1 | mmu-miR-5623-5p | mmu-miR-6911-5p | mmu-miR-7688-5p | mmu-miR-7242-3p | mmu-miR-216a-3p |
mmu_circ_0000659 | 3.281563 | NM_029582 | Txndc11 | mmu-miR-21a-3p | mmu-miR-5110 | mmu-miR-7038-5p | mmu-miR-331-3p | mmu-miR-3064-3p |
mmu_circ_0000212 | 3.168443 | NM_001037846 | Cnot2 | mmu-miR-6902-5p | mmu-miR-6914-3p | mmu-miR-7052-5p | mmu-miR-7214-3p | mmu-miR-6972-5p |
mmu_circ_0000805 | 3.13632 | NM_013933 | Vapa | mmu-miR-1298-5p | mmu-miR-672-3p | mmu-miR-19b-1-5p | mmu-miR-7212-3p | mmu-miR-19b-2-5p |
mmu_circ_0001458 | 3.029251 | NM_013791 | Mkln1 | mmu-miR-296-5p | mmu-miR-8103 | mmu-miR-135a-5p | mmu-miR-135b-5p | mmu-miR-30d-3p |
mmu_circ_0000083 | 2.999915 | NM_001166501 | Dennd1b | mmu-miR-145a-5p | mmu-miR-145b | mmu-miR-122-5p | mmu-miR-103-3p | mmu-miR-107-3p |